Within the agricultural industry, bioinformatics has been used to expand the current understanding of various plant functions, protect plants against harmful stressors, and improve plant quality for human consumption.
What are the benefits of Bioinformatics in agriculture?
The genome sequencing of the plants and animals has also provided benefits to agriculture. Tools of bioinformatics are playing significant role in providing the information about the genes present in the genome of theses species. These tools have also made it possible to predict the function of different genes and factors affecting these genes.
What are bioinformatics tools and how do they work?
Bioinformatics tools provide the genomic information to the agriculturists due to which they are able to make plants resistant of drought, insects and pests… Bioinformatics is a new field of science but it is making progress in every field of biotechnology very rapidly.
What is the role of Bioinformatics in agri-genomics?
Within the field of agricultural genomics, or agri-genomics, bioinformatics is playing an increasingly important role in the collection, storage, and analysis of genomic data. What is bioinformatics?
What is the role of Bioinformatics in Human Genome Project?
With the development of Human Genome Project, the data of biology increased fabulously and marvelously. The ability to capture, manage, process, analyze and interpret data became more important than ever. Bioinformatics is a new field of science but it is
What is agricultural bioinformatics?
The important areas of agricultural bioinformatics are pan-genome analysis of crops, assembly of plant genomes, identification of homeologs, genomic selection of crops and modelling of agricultural systems for enhanced agricultural productivity.
Why is bioinformatics important for plant breeding?
Key objectives for plant bioinformatics include: to encourage the submission of all sequence data into the public domain, through repositories, to pro- vide rational annotation of genes, proteins and phenotypes, and to elaborate relationships both within the plants’ data and between plants and other organisms.
How is biology used in agriculture?
Systems biology has a potential for development of sustainable agriculture; it can be used to model and analyze complex traits linked with agricultural productivity such as nitrogen use efficiency, photosynthetic efficiency, water use efficiency, and other essential traits associated with plant architecture and plant …
How are genomics used in agriculture?
Agricultural genomics uses technology to study and classify the genes of plants in order to develop new, specific varieties of crops. These new crops can help address various food problems around the world and can improve the productivity and sustainability of many plant varieties and livestock productions.
What are the applications of bioinformatics?
Applications of BioinformaticsBiotechnology.Alternative Energy Sources.Drug Discovery.Preventive Medicine.Biofuels.Plant Modelling.Gene Therapy.Waste Clean-up.More items…
How does bioinformatics help in biotechnology?
There exists a number of applications of bioinformatics for accelerating research in the area of biotechnology that include automatic genome sequencing, gene identification, prediction of gene function, prediction of protein structure, phylogeny, drug designing and development, identification of organisms, vaccine …
How is biotechnology applied in agriculture?
How is Agricultural Biotechnology being used? Biotechnology provides farmers with tools that can make production cheaper and more manageable. For example, some biotechnology crops can be engineered to tolerate specific herbicides, which make weed control simpler and more efficient.
How does biotechnology help in agriculture?
Biotechnology allows farmers to grow more food on less land using farming practices that are environmentally sustainable. Through biotechnology: Seeds yield more per acre, plants naturally resist specific insect pests and diseases, and farming techniques improve soil conservation.
What is biotechnology application in agriculture?
Application of Biotechnology in Agriculture involves scientific techniques such as Genetically Modified Organisms, Bt Cotton, Pest Resistant Plants. It helps in modifying plants, animals, and microorganisms and improve their agricultural productivity.
How is genetic engineering used in agriculture?
Some benefits of genetic engineering in agriculture are increased crop yields, reduced costs for food or drug production, reduced need for pesticides, enhanced nutrient composition and food quality, resistance to pests and disease, greater food security, and medical benefits to the world’s growing population.
What is genome sequencing agriculture?
Methods for Genome Sequencing in Agriculture Identify genes, SNPs, and structural variants while simultaneously determining genotypes. Transcriptome Sequencing. RNA sequencing provides novel insights into changing gene expression levels that occur in development and during disease and stress conditions.
Why is DNA important for agriculture?
In agriculture, recombinant DNA has improved plant growth by increasing nitrogen fixation efficiencies, by cloning bacterial genes, and inserting them into plant cells. Other plants have been engineered to be resistant to caterpillar, pests, and viruses by inserting resistant genes into plant genomes.
What is the role of bioinformatics?
Tools of bioinformatics are playing significant role in providing the information about the genes present in the genome of theses species. These tools have also made it possible to predict the function of different genes and factors affecting these genes. The information provided about the genes by the tools makes the scientists to produce enhanced …
Why is bioinformatics important?
Bioinformatics tools provide the genomic information to the agriculturists due to which they are able to make plants resistant of drought, insects and pests… Bioinformatics is a new field of science but it is making progress in every field of biotechnology very rapidly.
What is the bacterial species that protects plants from pests?
Bacillus thuringiensis is bacterial specie which increases the soil fertility and protects the plants against pests. When the researchers mapped its genome, they used its genes to incorporate into the plant to make it resistant against insects.
What is the use of knowing the genome of A. thaliana?
There are many uses of knowing the genome of A. thaliana but the major use is that the yield of the plants can be increased. Insect Resistance:-.
Why is Bt important in plants?
The use of Bt genes in the plants genome has made the agriculturists to use the insecticides in very little amount. As a result the productivity and nutritional value of plants will also increase and will be beneficent for human health. Improve nutritional Quality:-. When the changes are made in the genome of the plants, …
Can genes be modified to improve the production of meat and milk?
Similarly specific genes can be modified to improve the production of meat and milk. Certain changes can be made in their genome to make them disease resistant. Crops:-. When the evolutionary changes occurred in the plants, their genome remained conserved and did not provided much information. Since the arrival of bioinformatics tools, it is …
Can bioinformatics extract information from the genome of specific plants?
Since the arrival of bioinformatics tools, it is possible to extract the required information from the genome of specific plants. There are two species of food plants, the genome of which has been mapped completely for example Arabidopsis thaliana and Oryza sativa. These two species of plants have their names in English as water cress …
What are some examples of plant genomes?
In this regard, examples of existing full plant genomes are Arabidopsis thaliana (water cress) and Oryza sativa (rice). Also one of the resources for receiving energy by converting into biofuels such as ethanol is plant based biomass and it could be used as for vehicles and planes.
Why is networking important in a laboratory?
In addition, the advantages of networking have been important for the management of laboratory data with little or no human intervention. LIMS or laboratory information management systems, let users at different workstations or geographic locations to browse, edit, analyze and comment the data.
How to use QTL information?
Use of QTL information: It is supposed to be that some but not all loci are determined, so selection should be based on the combination of phenotypic and molecular data; in the process of selection, the link of markers and traits could reduce so this link should be observed over the generations ; in the process of selection, QTLs demonstrate contemporaneous existence of the wanted genes in a line; in crossbred programs, QTLs could predict the efficiency of untested crosses, including their non-additive effect on the data of the parent lines and restricted number of crosses.
What is the meaning of the word “genome”?
Therefore ‘genome’ describes all of the genes and information on non-coding DNA that have the potential to be present. However, in eukaryotes like plants, protozoa or animals, ‘genome’ is typically associated with only the information on chromosomal DNA.
Why are model organisms important?
Due to the exstensive study of their characteristics these model organisms become even more valuable.
How does genomics affect food?
The implications of genomics with relation to food, feed and fibre production can be visualized on a lot of fronts. At the most essential level, the progress in genomics will considerably speed up the acquisition of knowledge and that, in turn, will directly effect on many aspects of the processes associated with plant improvement. Knowledge of the function of all plant genes, according to the further elaboration of tools for modifying and examining genomes, will lead to the evolution of an original genetic engineering paradigm in which rational changes can be intented and modelled from first principles.
What is the name of the DNA that is stored in the mitochondria?
The term genome can be applied particularly to the whole genetic material of an organism including the full set of nuclear DNA (i.e., nuclear genome) and also to the genetic information stored within organelles, which have their own DNA – the ‘mitochondrial genome’ or the ‘chloroplast genome’.
What are the skills required for bioinformatics?
Bioinformatics problems from the agricultural science that span multiple disciplines provide a perfect setting for students to acquire and practice a variety of transferrable skills such as teamwork, communication, computing, data management, statistical analysis, drawing inferences, etc.
How does bioinformatics help the world?
Furthermore, it has been noted in the National Research Council report on A New Biology for the 21st Century that bioinformatics will play a crucial role in overcoming the food challenge of the world by helping to generate food plants to adapt and grow sustainably in changing environments.
What are some examples of food security?
Policy-making, farm management, and livestock production are examples of various disciplines with profound impacts on food security. These disciplines, in turn, depend on fast, reliable scientific information acquisition and analysis in the research sector.
Is bioinformatics a new area?
Recruitment and retention. As bioinformatics is a relatively new interdisciplinary area, it has not yet been a subject of emphasis in food and agricultural sciences education. On the other hand, as will be described in the tick genome analysis projects, bioinformatics skills are very useful in cutting-edge agricultural science research.
What is the role of bioinformatics in the genome?
Tools of bioinformatics are playing significant role in providing the information about the genes present in the genome of these species. These tools have also made it possible to predict the function of different genes and factors affecting these genes.
How does genome sequencing help agriculture?
The genome sequencing of the plants and animals has also provided benefits to agriculture. Application of various bioinformatics tools in biological research enables storage, retrieval, analysis, annotation and visualization of results and promotes better understanding of biological system in fullness.
How does bioinformatics help understanding biology?
Bioinformatics helps in the study of protein structures and the discovery of sequence sites where protein-protein interactions take place. To help understanding biology at the system level, bioinformatics begins to show promise in unraveling genetic networks.
Why is bioinformatics important?
Bioinformatics has come out as a tool to smoothing the ways for biological discoveries. With the development of Human Genome Project, the data of biology increased fabulously and marvellously. The ability to process, manage, capture, interpret and analyze data became more important than ever. Bioinformatics is the application …
Why are genes inserted in rice genomes?
For example some genes are inserted in the rice genome to increase the Vitamin A level in the crop.
What is bioinformatics in agriculture?
Bioinformatics is an interdisciplinary area of the science composed of biology, mathematics and computer science. Bioinformatics has come out as a tool to smoothing the ways for biological discoveries. With the development of Human Genome Project, …
How many chromosomes does a water cress have?
Researchers took interest in its genome because of its smaller genomic size and studied the plant developmental processes. Its genome consists of 5 chromosomes on which 100Mbp DNA is distributed. It reproduces in 5 weeks and makes new generation.
Description
Bioinformatics in Agriculture: Next Generation Sequencing Era is a comprehensive volume presenting an integrated research and development approach to the practical application of genomics to improve agricultural crops.
Table of Contents
1. Advances in Agricultural Bioinformatics: Outlook of Multi-Omics Approaches
About the Editors
Dr. Pradeep Sharma received his Ph.D. from HAU Hisar. For his PhD thesis, he worked on cloning and characterization of phyto- viruses. He performed his Post-Doctoral Research (2006-2008) at Tohoku University, Japan with Prof M Ikegami as JSPS fellow, where he worked on Genome sequencing and RNA silencing.
An Overview of Bioinformatics
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Genomics in Agriculture
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The term genome is used to describe the complete genetic material of an organism in terms of its nuclear deoxyribonucleic acid (DNA) content; however, it should be noted that other genetic information can be stored within organelles aside from the nucleus, which can include the genome of the mitochondria or the chloroplast, the latter of which is only present in plants. The genomic analysis of eukaryotic species, which is typically confin…
Available Tools
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Plant genome analysis is of great economic importance for not only the agricultural industry but also for the overall maintenance of animal and human health. Many different bioinformatics tools have been developed to assist in the gathering, consolidation, and analysis of the vast amount of information that is available on these living systems. Some of the most widely used plant/crop bioinformatics online databases include BGI Rice Infor…
References and Further Reading
- Singh, V. K., Singh, A. L., Chand, R., & Kushwaha, C. (2011). Role of Bioinformatics in Agriculture and Sustainable Development. International Journal of Bioinformatics Research 3(2); 221-226. Avai…
- Aslam Z., Khattak J.Z.K., Ahmed M., Asif M. (2017) A Role of Bioinformatics in Agriculture. In: Ahmed M., Stockle C. (eds) Quantification of Climate Variability, Adaptation, and Mitigation for Agri…
- L09: The role of bioinformatics in agriculture [Online]. Available from: https://biotechgo.org/training/jsep/el-ba…
- Singh, V. K., Singh, A. L., Chand, R., & Kushwaha, C. (2011). Role of Bioinformatics in Agriculture and Sustainable Development. International Journal of Bioinformatics Research 3(2); 221-226. Avai…
- Aslam Z., Khattak J.Z.K., Ahmed M., Asif M. (2017) A Role of Bioinformatics in Agriculture. In: Ahmed M., Stockle C. (eds) Quantification of Climate Variability, Adaptation, and Mitigation for Agri…
- L09: The role of bioinformatics in agriculture [Online]. Available from: https://biotechgo.org/training/jsep/el-basic?view=article&id=146:lo9&catid=38.
